BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026G05LP1|AL428604
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1042 1666 0.0
>3x_Contig1042
Length = 3616
Score = 1666 bits (839), Expect = 0.0
Identities = 854/857 (99%), Gaps = 2/857 (0%)
Strand = Plus / Minus
Query: 1 gatctacagccggcttattacttgacatcgtcgattcacactgcgtga-ctcgtatattt 59
||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 856 gatctacagccggcttattacttgacatcgtcgattcac-ctgcgtgagctcgtatattt 798
Query: 60 gggcactaaagaaaagtactgaatagaacaatacaagacagagctggaagctagataaac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 797 gggcactaaagaaaagtactgaatagaacaatacaagacagagctggaagctagataaac 738
Query: 120 gcttgaaacagttgaaaagactctctttatatgaagctgtccgatgggcaatcaactggc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gcttgaaacagttgaaaagactctctttatatgaagctgtccgatgggcaatcaactggc 678
Query: 180 acagctcaaaaaaaaaagagtcagtagcacaggaatctggtccctttctcatcgcagata 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 acagctcaaaaaaaaaagagtcagtagcacaggaatctggtccctttctcatcgcagata 618
Query: 240 ttggcatcagatgtctttcacctatcatttggaccgttgaaattccagcggaaaatctgc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ttggcatcagatgtctttcacctatcatttggaccgttgaaattccagcggaaaatctgc 558
Query: 300 aaaaaaaaaaagggaaggagaagtacacaagtcacgtgaatgtttggaattatcaacaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 aaaaaaaaaaagggaaggagaagtacacaagtcacgtgaatgtttggaattatcaacaga 498
Query: 360 cttgccagtggagaataccagttgttaatggtttctttgtttgatatttcgaatcacttt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 cttgccagtggagaataccagttgttaatggtttctttgtttgatatttcgaatcacttt 438
Query: 420 tccatgttccaatactgctttgtagatgtgcgggctgcttttcaattttccacataggtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tccatgttccaatactgctttgtagatgtgcgggctgcttttcaattttccacataggtt 378
Query: 480 ttwatgaatgcaaacacccactaggtgttatattaccttgctgtgagaacttaacctata 539
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttaatgaatgcaaacacccactaggtgttatattaccttgctgtgagaacttaacctata 318
Query: 540 ttattatcgatagaagcttattgaaacgattacgacctcgagatcatcttgtttggaggt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttattatcgatagaagcttattgaaacgattacgacctcgagatcatcttgtttggaggt 258
Query: 600 aatagatgttaataatagcttcagcggttatttgttttcctggcctcttcacccatacac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aatagatgttaataatagcttcagcggttatttgttttcctggcctcttcacccatacac 198
Query: 660 ccggaaagcagcatatgattttcttacccggaatatagcacgtgaccaacttgctgttag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 ccggaaagcagcatatgattttcttacccggaatatagcacgtgaccaacttgctgttag 138
Query: 720 atttttctgtcgcctggcaggtaaggaccggtcccattcatcctaagctcataataaaac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atttttctgtcgcctggcaggtaaggaccggtcccattcatcctaagctcataataaaac 78
Query: 780 tgcgaccgcactataaatataaagacaattgcactggaaaagagccaattatgttgtaca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tgcgaccgcactataaatataaagacaattgcactggaaaagagccaattatgttgtaca 18
Query: 840 tatcctctctctgcctt 856
|||||||||||||||||
Sbjct: 17 tatcctctctctgcctt 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,871
Number of Sequences: 1807
Number of extensions: 12871
Number of successful extensions: 63
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)